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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA16326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 224aa MW: 25971.4 Da PI: 9.2473 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 100.1 | 8.7e-32 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyeys+ OVA16326.1 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSN 59 79***********************************************95 PP | |||||||
2 | K-box | 112.5 | 4.3e-37 | 76 | 173 | 3 | 100 |
K-box 3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +s+++s ea+a ++qqe++kL+++i+ Lq+++Rhl+G++L+sL++keL+qLe++Le++l++iRskK+e+l+++ie++q++e elq+en+ Lr+k++e OVA16326.1 76 SSNTTSIVEANAHYYQQEATKLRQQIQILQNSNRHLMGDSLNSLTVKELKQLENRLERGLSRIRSKKHEMLFAEIEYMQRREVELQKENMFLRTKIAE 173 45566689999************************************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRLYEYSNS 60 SIKTTIERYK KACADSSNTT SIVEANAHYY QQEATKLRQQ IQILQNSNRH LMGDSLNSLT 120 VKELKQLENR LERGLSRIRS KKHEMLFAEI EYMQRREVEL QKENMFLRTK IAENENAEQQ 180 TSMVPAPEFD PIQTYDSRNY FHVNMLDGGP SSYSHPDQTA LHLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09960.1 | 1e-109 | MIKC_MADS family protein |