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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA15871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | AP2 | ||||||||
Protein Properties | Length: 496aa MW: 55758.8 Da PI: 8.2077 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.6e-17 | 148 | 197 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OVA15871.1 148 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 197 78*******************......55************************997 PP | |||||||
2 | AP2 | 42.9 | 1.2e-13 | 240 | 290 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g OVA15871.1 240 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEVEAARAYDKAAIKCNG 290 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 496 aa Download sequence |
MLDLNDSPSG RKEKQSEGCS SQKTSVDGEE KGKGVGSFSN SSSSALVVSE EEESGGRKNK 60 SSMIFGFSVT HEDNCSSENE PVVTRQFFPM EESEMAGTAM GGFTPSFPRA QWVGVKFCQS 120 EPVGSAKPME VISQPMKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG KQVYLGGFDT 180 AHSAARAYDR AAIKFRGVEA DINFSLNDYE DDLKQMSNLT KEEFVHVLRR QSTGFPRGSS 240 KYRGVTLHKC GRWEARMGQF LGKKYVYLGL FDTEVEAARA YDKAAIKCNG KEAVTNFDPS 300 IYEDELNPGT GNNKDHNLDL CLGNSTSKHD HVDQSKDDNR FNVINQPILQ LQSQPIWTTN 360 DPSFRFKLSD EQCRSNNNPY IQSSSSLKAN EMYRYEQLRR NGETPPPIIH PLPQQPLNPQ 420 NYQLSSSSSG GRVGVGGPLE TIHEQLQRQW SSNKSSNGWP YVSTQLFTPT LQHHQDSHRR 480 PQNLQVGLQR LMDSSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-124 | AP2 family protein |