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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA15241.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 240aa MW: 27569.4 Da PI: 10.1351 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87 | 1e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev +iifsstgkly++ss OVA15241.1 10 RIDNTTSRQVTFSKRRNGLLKKAKELAILCDAEVGLIIFSSTGKLYDFSS 59 8***********************************************96 PP | |||||||
2 | K-box | 86.7 | 4.7e-29 | 81 | 170 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++++ + +q+e+a L+ +++nLq+++R+l+Ge+L+ Ls k+Lq+Le+qLe sl+ +R++K+++l+++i+el +k + l++en++L kk+ OVA15241.1 81 NATSEVKFWQREAASLRHQLQNLQETHRQLMGEELSGLSTKDLQNLENQLEMSLRGVRTQKDQILTDEIQELNRKGNLLHHENMELYKKV 170 678899*********************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MGRGKIVIRR IDNTTSRQVT FSKRRNGLLK KAKELAILCD AEVGLIIFSS TGKLYDFSST 60 SMKSVIERYN KSKEDHHQLM NATSEVKFWQ REAASLRHQL QNLQETHRQL MGEELSGLST 120 KDLQNLENQL EMSLRGVRTQ KDQILTDEIQ ELNRKGNLLH HENMELYKKV NLIRQENADL 180 YKKVNGTRDA TGATKNSHLP TGFSIAEDLH PPIHLQLSQP QQQNYEIPAR ATKLGRLQLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 1e-104 | MIKC_MADS family protein |