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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA13761.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | AP2 | ||||||||
Protein Properties | Length: 400aa MW: 44974.6 Da PI: 6.0251 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 32.5 | 2.1e-10 | 71 | 127 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d s+n ++k+ + g ++ +e Aa ++ a+ k++g OVA13761.1 71 SIYRGVTRHRWTGRYEAHLWDkNSWNPiQNKKGRQGAYDDEEAAAHTYDLAAIKYWG 127 57*******************77777788888888********************98 PP | |||||||
2 | AP2 | 51.5 | 2.5e-16 | 170 | 221 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg+f t eeAa+a++ a+ +++g OVA13761.1 170 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTFSTQEEAAAAYDVAAIEYRG 221 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 400 aa Download sequence |
MKSSPPSSTC SSSASTTDDH SVSLHNNQLP LSPPPPPPPP SKSAKPKIRR TRRTPNPEKR 60 QFNNSPGRRS SIYRGVTRHR WTGRYEAHLW DKNSWNPIQN KKGRQGAYDD EEAAAHTYDL 120 AAIKYWGRDT IVNFPATTYE KEIEEMRNVS KEEYLASLRR RSSGFSRGVS KYRGVARHHH 180 NGRWEARIGR VFGNKYLYLG TFSTQEEAAA AYDVAAIEYR GMNAVTNFDI SRYVKFPQLS 240 PPQFQQSSSS YFIESQEMTP SHQIPTPELP QSIDQSTVIH PIEEDPWSLC MDSGFNPLPV 300 PNISLEKSSE LPDLFNDTGF EDNIEFLFEG ILGNNKEGLR SNEEEDNGIN LDGIFDNSIE 360 FDGGDLLGGL GVDGEEQSLN NASTRNSSSV SYPFPIRICS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 2e-85 | AP2 family protein |