![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA13376.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 636aa MW: 71295.3 Da PI: 6.1217 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 37.3 | 6.8e-12 | 311 | 367 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + ++ ++ k + g ++ +e+Aa+a++ a++k++g OVA13376.1 311 SQYRGVTRHRWTGRYEAHLWDnSC-RKegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 367 78*******************433.44555535555.779999**************98 PP | |||||||
2 | AP2 | 40.4 | 7.6e-13 | 412 | 462 | 3 | 55 |
AP2 3 ykGV.rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV r +++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OVA13376.1 412 YRGVtRLHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 462 9****************988532...5************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 636 aa Download sequence |
MSNSSWLGFS LTPHLSIDDG FGGGEEEEEE VGGFSSSHHH MSVMPLRSDG SLCVVDAFRR 60 STGADYFFIF VDWRYENTLA TSTTTERDDQ GPKLEDFLGG YSNSTPDHHQ NNDVYYQTHH 120 QQTFNEGDDG DHQDPNSGSC RINMNIPPPP ATFNNEVVER EMEDNLTNPS PLNQSFHHYH 180 ENPQTLMSNS DHLQSYNLNT NPNPNNNLYH HVPLDSATSI SGFKTWLRQA PFSSDQKSSV 240 VHDANNNNNN SNNFQTLSLS MSPGSQQPSS ALCSVQPSTT VTESRKRSVG KSLTREPVPR 300 KSIDTFGQRT SQYRGVTRHR WTGRYEAHLW DNSCRKEGQT RKGRQGGYDK EEKAARAYDL 360 AALKYWGPTT HINFPLSTYE QELEEMKNMN RQEFVANLRR KSSGFSRGAS MYRGVTRLHH 420 QHGRWQARIG RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGVSAVTNFD ISKYDVKRIC 480 SSSTLIGGDL AKRSPRDSSS ASHEHESGQQ PLAITNVDQS IQSSDEFATI MWSNNSDEQE 540 QHQNQNQITN DPNSSVHSMS HQNSSNPGSP KSSVASQSEY DHNVGGGEYS QFSMNSTKYE 600 NGSDDQCPVN WMAAATDRPA NLSVVHQLPM FALWNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-127 | AP2 family protein |