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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA13337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | AP2 | ||||||||
Protein Properties | Length: 271aa MW: 30872.4 Da PI: 8.3614 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.9 | 3.4e-15 | 71 | 130 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse....ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++g+++A+++d ++ ++ k k+++lg + t+e+Aa a++ a++k++g OVA13337.1 71 SNYRGVTRHRWTGKFEAHLWDNTTisetRKrKGKQVYLGGYETEEKAALAYDLAALKFWG 130 57*******************655665433555************************987 PP | |||||||
2 | AP2 | 45.1 | 2.4e-14 | 175 | 226 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++ + rW A+I + + ++lg+++t+eeAa+a++ a+ kl+g OVA13337.1 175 SIYRGVTRQHEGRRWQARIGRV-----AggRDIYLGTYDTEEEAAEAYDIAAVKLRG 226 57****98888999****9885.....234*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MSTLVPENEE TSQSELIFTD QASSEGNFER LPSDTSHLVP LPSSSVVGPE SSSTGNDQVK 60 KALYKFGQRT SNYRGVTRHR WTGKFEAHLW DNTTISETRK RKGKQVYLGG YETEEKAALA 120 YDLAALKFWG TGAHTKLNFP ISNYEKEIEE MKDMSREEYI NSLRRKSICF ARGNSIYRGV 180 TRQHEGRRWQ ARIGRVAGGR DIYLGTYDTE EEAAEAYDIA AVKLRGMNAI TNFHISNYYK 240 EGSKELDILP IQTTEEERPT VTVRRFKLST T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 1e-68 | AP2 family protein |