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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA13336.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | AP2 | ||||||||
Protein Properties | Length: 438aa MW: 48326.5 Da PI: 5.6545 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 46.1 | 1.2e-14 | 198 | 257 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+++ ++g+++A+++d ++ g ++ k++ lg ++ +e+Aa+a++ ++k++g OVA13336.1 198 SKYHGVTRHFWTGKFEAHLWDnSYIrEGhrRKgKQVFLGQYDNEEKAARAYDLVALKYWG 257 89*******************666676686336*************************98 PP | |||||||
2 | AP2 | 39.7 | 1.2e-12 | 301 | 351 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++ +grW A+I p g r+ +lg+f ++eeAaka++ a k++g OVA13336.1 301 SIYRGVTRHG-DGRWQARISGiP---G-RRGLHLGTFSSEEEAAKAYDIASIKYRG 351 57*****999.9******76666...4.7************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 438 aa Download sequence |
MASSTPANEQ PSDSDISTKV QYSIEEKHES SFPDSAQSTN PSVLVNGQAP GCEISLGDQA 60 VDENCDSAPS VDTQLKPLPS SANEQTPGVG SQVTVEEKCG VSHSDNSNTE LKSLSVSELA 120 NGKIPESETS LRTKSSSEEN SDSQNVQSVL VSGTAMCLNL DSVKDLVCHN TEKKIEEAIP 180 LAVSAPKKLI EKDDHRTSKY HGVTRHFWTG KFEAHLWDNS YIREGHRRKG KQVFLGQYDN 240 EEKAARAYDL VALKYWGPNA STKLNFPISS YEKELEGMNH MSREEFVMFI RRKSCFKKGS 300 SIYRGVTRHG DGRWQARISG IPGRRGLHLG TFSSEEEAAK AYDIASIKYR GMKAFTNFDV 360 SNYSEVDLKE SEGEPEPKRL KKKVELTAST IVVAKSDPQP DVIAQTDITV RQNASWAWDT 420 QELLTLGSGN NVHLEGES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 7e-80 | AP2 family protein |