![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA12776.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 142aa MW: 16234.7 Da PI: 9.7809 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.3 | 4.2e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRrngi+KKA+E+ vLCda+v+++ifsstgk+ +y+s OVA12776.1 9 KRIENSTNRQVTYSKRRNGIIKKAKEITVLCDAKVSLVIFSSTGKMTDYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 73.5 | 5.9e-25 | 71 | 140 | 1 | 70 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKn 70 yqkssgk+l++ak+e+l+ e++++kke++++q e+Rhl+GedL+sL+ keL +e++Le++ ++R+k+ OVA12776.1 71 YQKSSGKKLWDAKHEYLSAEVDRIKKENDTMQIELRHLKGEDLTSLQPKELIPIEKALEDGYDRVRAKQA 140 899****************************************************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 142 aa Download sequence |
MGRGKIEIKR IENSTNRQVT YSKRRNGIIK KAKEITVLCD AKVSLVIFSS TGKMTDYCSP 60 SSSLIEILDR YQKSSGKKLW DAKHEYLSAE VDRIKKENDT MQIELRHLKG EDLTSLQPKE 120 LIPIEKALED GYDRVRAKQA SC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G20240.1 | 2e-72 | MIKC_MADS family protein |