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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA12253.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | AP2 | ||||||||
Protein Properties | Length: 543aa MW: 59757.5 Da PI: 6.5515 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 32.2 | 2.7e-10 | 170 | 226 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+ ++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g OVA12253.1 170 SIYRGVTKHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDREEKAARAYDLAALKYWG 226 57*******************5444.2455536655.779999**************98 PP | |||||||
2 | AP2 | 47.1 | 5.9e-15 | 271 | 320 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t+eeAa+a++ a+ k++g OVA12253.1 271 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 320 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 543 aa Download sequence |
MGSMNNNWLS FPLSPVHSSL SAHLHSSQTN QFSLGLVSDT MDHSFQNPDW NLISSHGGGI 60 GNEVPKVADF LGVEKSDNQT DLSAFNQIPA THESDYLLSN CTPQVAEISP SDDSSKDYES 120 QGNVGNLQSL TLSMGTGKGT SSNNVEVSVA NNAVEETPRR AIDTFGQRTS IYRGVTKHRW 180 TGRYEAHLWD NSCRREGQSR KGRQGGYDRE EKAARAYDLA ALKYWGTSTT TNFPISIYEK 240 ELEEMKHMTR QEFVASLRRK SSGFSRGASM YRGVTRHHQH GRWQARIGRV AGNKDLYLGT 300 FSTEEEAAEA YDIAAIKFRG LNAVTNFDMN RYDVKSILES NTLPIGGASK RLKETQDTET 360 LRKREEIKAI GSSFYDGNSS GFQGYPMVPP FEQTQPLLAL QNQQNYHYTQ DPHIHQNYMN 420 HQLHQNPSST ILHSSQGSQF HQGFFQNQPT MLHGLMTMGS SSSLMGSNGS SSNSYDEAAY 480 FGNGIALAAN PSAGNAGGIG SMTDLGLVKV DYDINSGSYG GWPAESVHGN GANPGSFTMW 540 NDN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20840.1 | 1e-166 | AP2 family protein |