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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA11247.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | AP2 | ||||||||
Protein Properties | Length: 481aa MW: 53903 Da PI: 5.9745 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 6e-17 | 182 | 231 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OVA11247.1 182 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 231 78*******************......55************************997 PP | |||||||
2 | AP2 | 45.9 | 1.4e-14 | 274 | 324 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k++g OVA11247.1 274 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDTEIEAARAYDKAAIKYNG 324 89********.7******5553..2.26**********99************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence |
MWDLNDSPDQ RREDESEGCS SHKTSGDGDY EKGKRVGSIS NENSSSSAVL FIEEGSDDFD 60 QEAGVGVDEG RERRKRTSSN STSSSKIFGF SMSTTHEEES EPASVVVTRE FFPVGESSEM 120 ETQVDGGTAP FPRAHWVGVR FQSEEASLVA AAAKKAAESS LAHQQPANIN KKSRRGPRSR 180 SSQYRGVTFY RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GVEADINFSL 240 DDYEDDLKQM TNLTKEEFVH VLRRQSTGFP RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI 300 YLGLFDTEIE AARAYDKAAI KYNGKEAVTN FDPSVYETEL NSSGKDGNHN LDLSLGSSSS 360 SKNNNLESRD DNGSSANASP LIWFEPDWRN NNQGFRSMVP DEPSMISSTS NLSNREAGCD 420 DQRETLQMLN NTHIQTPISQ KINDHQMQRY DQQFKRNGET PMLQILQSSH FRPPIYQVGS 480 L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-111 | AP2 family protein |