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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA11003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 284aa MW: 31446.7 Da PI: 6.145 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.6 | 2.5e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdae+a+iifss+gklye++s OVA11003.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSSRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 91.6 | 1.4e-30 | 86 | 171 | 12 | 97 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 + + +q++ kLk+++e Lq+++R+llG+dLe+Ls+keL qLe+qLe slk++Rs+K++++l++++elq ke++lqe+n+a+++k OVA11003.1 86 DVQDETYQDYLKLKSRVEVLQQNHRNLLGQDLEPLSVKELDQLENQLEVSLKQVRSTKTQFMLDHLSELQIKEQMLQEANTAMNRK 171 44567899************************************************************************998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MGRGKVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALIIFSS RGKLYEFCSS 60 SSMLKTLERY QSCTSSSSQS CIPAKDVQDE TYQDYLKLKS RVEVLQQNHR NLLGQDLEPL 120 SVKELDQLEN QLEVSLKQVR STKTQFMLDH LSELQIKEQM LQEANTAMNR KQLDENNNGE 180 IPLQLKWDAD EPKMISYNHD NAAAAASEGF FQPLQCNPTL QIGTPLISFS SDFSSLSLSL 240 SLLSLLMYIG GGGGGGEVVV VRQGWWRHGG CDGGGGDGGS CGGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 2e-84 | MIKC_MADS family protein |