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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA10047.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 253aa MW: 29069.8 Da PI: 9.2639 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84 | 8.8e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+EL +LCdaev ++ifsstgkly+++s OVA10047.1 10 RIDNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGLMIFSSTGKLYDFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 89.8 | 5.1e-30 | 87 | 176 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++ + +q+e+a L+++++nLq+++R+l+Ge+L+ Ls+k+Lq+Le+qLe sl+ +R kK+++l+++ieel +k + +++en++L kk+ OVA10047.1 87 NPTSEVKFWQREAASLRQQLQNLQENHRQLMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILTDKIEELNRKGNLIHQENMELYKKV 176 567889*********************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MGRGKIVIRR IDNSTSRQVT FSKRRNGLLK KAKELAILCD AEVGLMIFSS TGKLYDFAST 60 RSDDGTSMKS VIERYNKSKE EHHQLLNPTS EVKFWQREAA SLRQQLQNLQ ENHRQLMGEE 120 LSGLSVKDLQ NLENQLEMSL RGVRMKKDQI LTDKIEELNR KGNLIHQENM ELYKKVNLIH 180 QENMELHEKV YGSSRDVSGA NRNSLLPNDF SIGDDSHVPV HLQLSQPQQE NYDTPARATK 240 LGESTFYVKV TQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 1e-113 | MIKC_MADS family protein |