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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA09937.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | AP2 | ||||||||
Protein Properties | Length: 517aa MW: 56520.1 Da PI: 6.4098 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.3 | 6.6e-17 | 172 | 221 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g OVA09937.1 172 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 221 78*******************......55************************997 PP | |||||||
2 | AP2 | 35.2 | 3e-11 | 264 | 315 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt.aeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f++ e A +a+++a+ k +g OVA09937.1 264 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSeVEAASRAYDKAAIKCNG 315 89********.7******5553..2.26**********7889*********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 517 aa Download sequence |
MLDLNVGLSA DSTYDGDEMM MDKLTEGSGG LMDDSGTSNS SVVNVEASSN GGDEESCSTH 60 TKRSGGDLFA FNFDILKRDK SDKIAVEDDD LNRSHHDSDY VTRQLFPVDG GGSGDAVGFR 120 LGPSTASSSS SRPHWVDLSF CQPDTVQPEV KVVPQQQQQV KKSRRGPRSR SSQYRGVTFY 180 RRTGRWESHI WDCGKQVYLG GFDTAHAAAR AYDRAAIKFR GVEADINFNL SDYDDDLKQM 240 KNLTKEEFVH ILRRQSTGFS RGSSKYRGVT LHKCGRWEAR MGQFLGKKYI YLGLFDSEVE 300 AASRAYDKAA IKCNGREAVT NFELSSYEGE ILSDANMGGT DHNLDLNLGI SPPSFPNVPR 360 ANDGTGALHF QCAPFDPTDA RRASAVAAVG GEHPHGLALA SEQSPIWNGV YPGFFPNYEQ 420 ERSIEKRVEV GPQGLSNWVF QMNGHGSGAT AMPLFSTTAA SSGFSSSTTT ASSTASPLPP 480 QQPPNTSTTT HPRHYPPSAN ANYPPSANSP HYYYYRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-105 | AP2 family protein |