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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA08076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 159aa MW: 18242.5 Da PI: 10.0823 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82.8 | 2.1e-26 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien rqvtf+kRr g+lKKA+ELSvLCda++ +iifs++gklye s OVA08076.1 9 KRIENPVHRQVTFCKRRSGLLKKAKELSVLCDADIGIIIFSTHGKLYELS 58 79*********************************************977 PP | |||||||
2 | K-box | 48.8 | 3e-17 | 86 | 158 | 13 | 85 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkek 85 ++ ++++e+a +k+ei+ Lq+ +R + G + + +sl eL Le++Le +++iRs+K+++++++i+ l++k + OVA08076.1 86 QSLESEKEMAMMKQEIQLLQKGLRYMFGGGAGIMSLDELDGLEKHLELWIRNIRSTKMQIMFQEIQMLKNKVR 158 4557889**************************************************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MARGKVQLKR IENPVHRQVT FCKRRSGLLK KAKELSVLCD ADIGIIIFST HGKLYELSTK 60 GSMQDVIERY MEASRGAQIA EGEPKQSLES EKEMAMMKQE IQLLQKGLRY MFGGGAGIMS 120 LDELDGLEKH LELWIRNIRS TKMQIMFQEI QMLKNKVRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71692.1 | 4e-62 | MIKC_MADS family protein |