![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OVA06926.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
|
||||||||
Family | AP2 | ||||||||
Protein Properties | Length: 337aa MW: 38197.1 Da PI: 7.8914 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.4 | 1.3e-11 | 40 | 96 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g OVA06926.1 40 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDGEEAAAHAYDLAALKYWG 96 57*******************99998898888888999999**************98 PP | |||||||
2 | AP2 | 51.4 | 2.8e-16 | 139 | 190 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OVA06926.1 139 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 190 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 337 aa Download sequence |
MAKISQQNQK NTSNSNTNTP TKVKRKRKSV PRDSPPQRSS IYRGVTRHRW TGRYEAHLWD 60 KNCWNESQNK KGRQGAYDGE EAAAHAYDLA ALKYWGKETI LNFPLSTYEE ELKEMEGQSK 120 EEYIGSLRRR SSGFSRGVSK YRGVARHHHN GRWEARIGRV FGNKYLYLGT YATQEEAATA 180 YDMAAIEYRG LNAVTNFDLS RYIKWLRPNN PNPNSNPNPT LNPSQDDLGL NSPLNHQSSV 240 ENSIYQPRPT SGTTSSSALG LLLQSSKFKE MLERTTSETT ECPSTPPESD PPRCSFPDDI 300 QTYFECQDSG SYVEGDDIIF GDLNSFSSPM FPCELDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G79700.2 | 1e-90 | AP2 family protein |