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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA06174.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 142aa MW: 16543.9 Da PI: 10.2229 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91 | 5.9e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvt+skRr+gi+KKA ELSvLCdaev++ii+sst+k+ +y++ OVA06174.1 9 KRIENSTNRQVTYSKRRAGIFKKARELSVLCDAEVSLIIISSTDKVSDYIT 59 79*********************************************9975 PP | |||||||
2 | K-box | 55.3 | 2.9e-19 | 71 | 139 | 1 | 69 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 yq+ ++ +l+++++e+lq++l+k k+ ++ L+re+R+++GedL+ Ls++e Leq+L +sl+ +R +K OVA06174.1 71 YQEVTKIDLWSSHYEKLQENLNKQKEINSRLRREIRQRKGEDLNGLSYQEVCGLEQNLGSSLEIVRHRK 139 67788889************************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MGRGKIEIKR IENSTNRQVT YSKRRAGIFK KARELSVLCD AEVSLIIISS TDKVSDYITP 60 STNTKKLFDK YQEVTKIDLW SSHYEKLQEN LNKQKEINSR LRREIRQRKG EDLNGLSYQE 120 VCGLEQNLGS SLEIVRHRKV IN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54340.1 | 8e-50 | MIKC_MADS family protein |