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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA05565.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 142aa MW: 16639.1 Da PI: 9.7849 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.8 | 1.4e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++nrqvtfskRr g+lKKA+EL vLCda+ +iifsstgk++ey+s OVA05565.1 9 KRIENSTNRQVTFSKRRGGLLKKAHELAVLCDAQLGLIIFSSTGKMFEYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 61.4 | 3.7e-21 | 71 | 139 | 1 | 69 |
K-box 1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskK 69 yqk g + +e ++++ +e++++k+e++nLq + R++ GedL+ L +++L+qLeqqLe+s++kiR++K OVA05565.1 71 YQKVAGIRIQEYDNQQIFNEMTRMKNETDNLQASMRRFTGEDLSCLHYNDLEQLEQQLENSVNKIRTRK 139 67778888999999******************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MGRGKIEIKR IENSTNRQVT FSKRRGGLLK KAHELAVLCD AQLGLIIFSS TGKMFEYCSS 60 PLNMRQIIER YQKVAGIRIQ EYDNQQIFNE MTRMKNETDN LQASMRRFTG EDLSCLHYND 120 LEQLEQQLEN SVNKIRTRKF IT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.3 | 3e-49 | MIKC_MADS family protein |