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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA04014.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 251aa MW: 28793 Da PI: 8.9501 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.8 | 7.9e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr+g+lKKA+ELSvLCdaeva+iifsstgkl+e+ss OVA04014.1 9 KRIENATSRQVTFSKRRAGLLKKAQELSVLCDAEVALIIFSSTGKLFEFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 67.6 | 4.2e-23 | 81 | 172 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +e ++ + ++e++ Lk+ei++L+ + ++lG++L+ Ls keLq+Le+qL++++ ++++K++ll+eq+e+++ +e+++ en++Lrk++ee OVA04014.1 81 VEYDTERQQSKEINILKDEISKLRMAHLRMLGKELKGLSPKELQHLENQLNEGILLVKARKEQLLFEQLEQSRLQEQRALLENETLRKQVEE 172 44555667789******************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MGRGKIEIKR IENATSRQVT FSKRRAGLLK KAQELSVLCD AEVALIIFSS TGKLFEFSSS 60 GMKRTLSRYK KCQDCSESSL VEYDTERQQS KEINILKDEI SKLRMAHLRM LGKELKGLSP 120 KELQHLENQL NEGILLVKAR KEQLLFEQLE QSRLQEQRAL LENETLRKQV EELRALIPST 180 ERVMPPYLEF HPMDRKHHIK HDIISSNVVC NCVSERRGDS DTSLHLGLAS SDVYYKMKAP 240 ERASSSNDSD T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13790.1 | 3e-67 | MIKC_MADS family protein |