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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA01845.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | AP2 | ||||||||
Protein Properties | Length: 536aa MW: 59516 Da PI: 6.3521 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 34.7 | 4.4e-11 | 237 | 293 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +++Aa+a++ a++k++g OVA01845.1 237 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQSrKGRQ-GGYDKEDKAARAYDLAALKYWG 293 57*******************5444.2455535555.7799999*************98 PP | |||||||
2 | AP2 | 53.3 | 6.7e-17 | 336 | 387 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+fgt+eeAa+a++ a+ k++g OVA01845.1 336 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFGTEEEAAEAYDIAAIKFRG 387 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 536 aa Download sequence |
MTPTNWLSFS LSPLELLRSS QQSQILPTTK FMPYESSSSD SSHHYNFDTL YGNEYWSNIR 60 TAQVPPYAQE IQDVKEIKEP NVADFSFLSS LNHSQIQQTV PKLEDFLGGD SSSMHRYNTD 120 SQTETQESSL SNVYEQGTTY FGEQDLKTIT GSAGFQAFSS ANSGSEVDDS SVSVTGTRFS 180 YGNSLSLESR NELLFSDNSN QRLSLGVTSQ SSEKAIVSVD SESSKKVSTE TFGQRTSIYR 240 GVTRHRWTGR YEAHLWDNSC RREGQSRKGR QGGYDKEDKA ARAYDLAALK YWGPTATTNF 300 PVSNYTKEME EMKNMTKQEF IASLRRKSSG FSRGASIYRG VTRHHQQGRW QARIGRVAGN 360 KDLYLGTFGT EEEAAEAYDI AAIKFRGLNA VTNFEMNRYN VEAITNNELP IGGAAKRLKL 420 SLDAESESPQ AHHEQEPPTS SCCSSISTAP GVCYDSAATL YHQNLFHHLN STTDASSQTV 480 VTPTVLSSPS DFYGRNLLYG GPTTPFNINS HFNNTNTSAA NLNHQPWNVA ASYSSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10510.2 | 1e-141 | AP2 family protein |