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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA01776.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 228aa MW: 25911.3 Da PI: 8.6735 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 91.9 | 3.1e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n++ rqvtfskRr g++KKAeELSvLCdaeva+iifs tgkl+eyss OVA01776.1 9 KKIDNTTARQVTFSKRRRGLFKKAEELSVLCDAEVALIIFSATGKLFEYSS 59 68***********************************************96 PP | |||||||
2 | K-box | 53.2 | 1.2e-18 | 84 | 170 | 12 | 98 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + + + +a+L ke+ + +++R++ Ge+L L++++LqqLe+ Le +l+++ ++K e ++++i++lq+ke +l een++Lr+++ OVA01776.1 84 LELQLENSSYARLSKEVAEKSHQLRQMRGEELRGLNIEDLQQLEKSLEAGLSRVLETKGERIMKEIDTLQRKEIQLIEENERLRHQM 170 5566778889**************************************************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MAREKIQIKK IDNTTARQVT FSKRRRGLFK KAEELSVLCD AEVALIIFSA TGKLFEYSSS 60 SMKEILERHN LHSKNLQKLA QPSLELQLEN SSYARLSKEV AEKSHQLRQM RGEELRGLNI 120 EDLQQLEKSL EAGLSRVLET KGERIMKEID TLQRKEIQLI EENERLRHQM LGVSKSRKCV 180 AVDYSSQNLV QEEGQSSDSV TNFVSNNNSS AGPPPRDYDS SDTSLKLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 2e-95 | MIKC_MADS family protein |