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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OVA00297.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya
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Family | AP2 | ||||||||
Protein Properties | Length: 440aa MW: 49452.9 Da PI: 8.1152 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.9 | 7.6e-11 | 114 | 170 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+k + g ++ +e Aa+a++ a++k++g OVA00297.1 114 SRFRGVSRHRWTGRFEAHLWDkGSWNVtqKKKGKQ-GAYDDEECAARAYDLAALKYWG 170 789******************88887784446666.99***9**************98 PP | |||||||
2 | AP2 | 50.5 | 5.2e-16 | 213 | 264 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g OVA00297.1 213 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAAHAYDIAAIEYRG 264 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 440 aa Download sequence |
MNVQTESCLD NTYFGVEKGQ QSLISTPPKR VNLLDRLHPS LILQCESNPG RRRLSADNSE 60 GRVVKCVKRR RREPVVADTG SNTDQKDQQQ VDQSSTSTTT TTTTTTTTTV KRSSRFRGVS 120 RHRWTGRFEA HLWDKGSWNV TQKKKGKQGA YDDEECAARA YDLAALKYWG PTTFTNFPVS 180 DYEKEIEVMQ NVTKEEYLAS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL 240 YLGTYSTQEE AAHAYDIAAI EYRGINAVTN FDLSTYIRWL RPGANGLVAS QEARSTGEPQ 300 ALPKFQSNSF TVDDLGSPRN QEVFRREISV SSCSTKSSSS PTALSLLLRS SIFRELVEKN 360 SYSTNDEIDG DETKQLVQMG SEDEFGGIFY DGIADIPYVC STNVTMPSIE LQEEIESPSP 420 VYNQTGHSIW NGVLSMSSMH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 51 | 72 | RRRLSADNSEGRVVKCVKRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 4e-89 | AP2 family protein |