PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OUZ99373.1

Organism

Macleaya cordata

Taxonomic ID

56857

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Macleaya

Family

AP2

Protein Properties

Length: 617aa MW: 68152.6 Da PI: 7.6107

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OUZ99373.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35.6	2.3e-11	278	334	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ ++++gr++A+++d ++ g rk + g ++ +++Aa+a++ a++k++g OUZ99373.1 278 SQYRGVTKHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEQKAARAYDLAALKYWG 334 78*****************77776664346655.7799************98 PP
2	AP2	45.8	1.5e-14	379	428	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g OUZ99373.1 379 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 428 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 617 aa Download sequence
MEVPSDPHHH HPTQVSSASI STTVPTSFFP SPSHLNNSLI FHGVEGSNNG FYSHLSIMPL 60 KSDGSLCMME ALSRSQSEGL VSSSSPKLED FLGGTTMATH HYGSNDRDVM HGSLNSLQQP 120 NKQQQQQIEA QQNPYFFSGL TGHEMYRAPL EETNKETQLE NCSLQLPQMS EDGIQNLKNW 180 VARNYSTDPS MEHKMAWFLG DNGVGSGSVG GMGYRDLQSL SLSMSPGSQS SCVTIPQQIS 240 STGTECVAME TKKRGFENVG KKQTVHRKSI DTFGQRTSQY RGVTKHRWTG RYEAHLWDNS 300 CKKEGQTRKG RQGGYDMEQK AARAYDLAAL KYWGPSTFIN LSLDDYKEEL EEMKNMSRQE 360 YVAHLRRKSS GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD 420 IAAIKFRGVN AVTNFEITRY DVERIRASNA LLNGELAKRD KHITSNNGSR NNHSSAKNSI 480 TETGLSKQDN VGGLNPKIVL NHSQSQEPTK LTQILDHQKS VVTENYRNPS LLSEVLHDLI 540 EIGTANSAQE AEESLVTSLG SSREGSPDKI GLSMLFTGPS SSASKFTDAT TTTTTSMSSL 600 IPTAQLRPAV FAAWSDA

Sequence ? help Back to Top

Protein Sequence Length: 617 aa Download sequence

MEVPSDPHHH HPTQVSSASI STTVPTSFFP SPSHLNNSLI FHGVEGSNNG FYSHLSIMPL  60
KSDGSLCMME ALSRSQSEGL VSSSSPKLED FLGGTTMATH HYGSNDRDVM HGSLNSLQQP  120
NKQQQQQIEA QQNPYFFSGL TGHEMYRAPL EETNKETQLE NCSLQLPQMS EDGIQNLKNW  180
VARNYSTDPS MEHKMAWFLG DNGVGSGSVG GMGYRDLQSL SLSMSPGSQS SCVTIPQQIS  240
STGTECVAME TKKRGFENVG KKQTVHRKSI DTFGQRTSQY RGVTKHRWTG RYEAHLWDNS  300
CKKEGQTRKG RQGGYDMEQK AARAYDLAAL KYWGPSTFIN LSLDDYKEEL EEMKNMSRQE  360
YVAHLRRKSS GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD  420
IAAIKFRGVN AVTNFEITRY DVERIRASNA LLNGELAKRD KHITSNNGSR NNHSSAKNSI  480
TETGLSKQDN VGGLNPKIVL NHSQSQEPTK LTQILDHQKS VVTENYRNPS LLSEVLHDLI  540
EIGTANSAQE AEESLVTSLG SSREGSPDKI GLSMLFTGPS SSASKFTDAT TTTTTSMSSL  600
IPTAQLRPAV FAAWSDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-139	AP2 family protein