PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022153515.1

Organism

Momordica charantia

Taxonomic ID

3673

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica

Family

AP2

Protein Properties

Length: 347aa MW: 38868.2 Da PI: 8.5434

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022153515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.5	4.4e-15	48	107	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++ g k+ ++++lg ++ + Aa a++ a++k++g XP_022153515.1 48 SVYRGVTRHRWTGRYEAHLWDkNCWnEGqnKKgRQVYLGAYDDEAAAAHAYDLAALKYWG 107 78*****************999963367556******99***********98 PP
2	AP2	50.7	4.3e-16	150	201	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + +k+ +lg++ t eeAa a++ a+ +++g XP_022153515.1 150 SKYRGVARHHHNGRWEARIGRVXG---NKYLYLGTYATQEEAATAYDMAAIEYRG 201 89**99******999533...5***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MGKISHPPHK NSISTTDNTH STTPRHERKL QKRKRKTVPR DSPAQRSSVY RGVTRHRWTG 60 RYEAHLWDKN CWNEGQNKKG RQVYLGAYDD EAAAAHAYDL AALKYWGTET VLNFPLLTYQ 120 DELKEMEGQS REEYIGFLRR KSSGFSRGVS KYRGVARHHH NGRWEARIGR VXGNKYLYLG 180 TYATQEEAAT AYDMAAIEYR GLNAVTNFDL SRYIKSLRPR QQQSIISNNR PPNPNAGELP 240 ALEFDPNSXL GFTFPSQCSS SGQPATAPLP GPGGGDSSSS AALGLLLQSS KLQDVLERTS 300 AADAPETPPE SDRPRRCFPD DVQTYFDSTQ DSGDFAESDD XIFGCID

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MGKISHPPHK NSISTTDNTH STTPRHERKL QKRKRKTVPR DSPAQRSSVY RGVTRHRWTG  60
RYEAHLWDKN CWNEGQNKKG RQVYLGAYDD EAAAAHAYDL AALKYWGTET VLNFPLLTYQ  120
DELKEMEGQS REEYIGFLRR KSSGFSRGVS KYRGVARHHH NGRWEARIGR VXGNKYLYLG  180
TYATQEEAAT AYDMAAIEYR GLNAVTNFDL SRYIKSLRPR QQQSIISNNR PPNPNAGELP  240
ALEFDPNSXL GFTFPSQCSS SGQPATAPLP GPGGGDSSSS AALGLLLQSS KLQDVLERTS  300
AADAPETPPE SDRPRRCFPD DVQTYFDSTQ DSGDFAESDD XIFGCID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	4e-84	AP2 family protein