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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022153451.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | AP2 | ||||||||
Protein Properties | Length: 415aa MW: 46126.8 Da PI: 7.7776 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.6 | 9.7e-16 | 179 | 238 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022153451.1 179 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 238 78*******************655454478446*************************98 PP | |||||||
2 | AP2 | 47.1 | 6.1e-15 | 283 | 332 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022153451.1 283 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 332 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 415 aa Download sequence |
DGSLCIDAAA HDWRSYENGE EESPKLEDFL GNCYSNSPPN DQGRGGGYCT QNPEQQQQTH 60 NNNNTFIQPN NNNNNNNNNS NSNYNYDCQA DHQTLIPNNN NAIYKSWLGP TPSAENECGF 120 QSLSLGMSPT SINDIASLPS PPPLAADSRK RPVAVAVAKP LLKEPVPRKS IDTFGQRTSQ 180 YRGVTRHRWT GRYEAHLWDN SCRKEGQTRK GRQVYLGGYD KEEKAARAYD LAALKYWGPT 240 THINFPLSSY ENELEEMKNM TRQEFVANLR RKSSGFSRGA SMYRGVTRHH QHGRWQARIG 300 RVAGNKDLYL GTFSTQEEAA EAYDIAAIKF RGTSAVTNFD IGRYDVKRIC SSSTLIAGGL 360 AKRSPLKDGT LSTTEDYTAC ASPSSSQPLL AIAGDGSAES HNELADMVWF ILFNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 1e-129 | AP2 family protein |