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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022151327.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | AP2 | ||||||||
Protein Properties | Length: 323aa MW: 36817.4 Da PI: 9.822 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.7 | 9e-16 | 62 | 121 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+n k+ k+++lg ++ +e Aa+a++ a++k++g XP_022151327.1 62 SRFRGVSRHRWTGRFEAHLWDkGSWNPtqrKKgKQVYLGAYDEEESAARAYDLAALKYWG 121 789******************988855556447*************************98 PP | |||||||
2 | AP2 | 52.8 | 9.7e-17 | 164 | 215 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g XP_022151327.1 164 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDMAAIEYRG 215 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MDFTVLNSDF CPIRSDSMAL KCKKRRRRST SSSTLLEGAA TSGDGPRHKS QTDRSTTTKR 60 SSRFRGVSRH RWTGRFEAHL WDKGSWNPTQ RKKGKQVYLG AYDEEESAAR AYDLAALKYW 120 GTSTFTNFPT SDYEEEVRIM KTMTKEEYLA SLRRXXXXXX XGVSKYRGVA RHHHNGRWEA 180 RIGRVFGNKY LYLGTYSTQE EAARAYDMAA IEYRGINAVT NFELSSYITW LKPHSQSHSH 240 HYNSSIFQHN IPLPDTATYL FQATAAATTT ADTSRTALGL LLKSSVFRDL LQKNVLNIDG 300 DQAEDQISMS PFHYTPLLTE GCL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 20 | 26 | LKCKKRR |
2 | 23 | 28 | KKRRRR |
3 | 88 | 96 | PTQRKKGKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 3e-82 | AP2 family protein |