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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022146224.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | AP2 | ||||||||
Protein Properties | Length: 481aa MW: 52690 Da PI: 7.143 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.7 | 5.3e-17 | 158 | 207 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022146224.1 158 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 207 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence |
MFDLNLNVDS PDATQNGDSV MFFEKLPQGS GNQMDEYESG TSNSSIVNAD TSSNGGDDDS 60 CSTRAAGELF TFNFEILKAG SANDVVTKEF FPIGGTVNAD FGSLQGQNSA SSSSSSSRKN 120 WINLAFDRSG SGGEGRIVQP VQPQQVKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG 180 KQVYLGGFDT AHSAARAYDR AAIKFRGVDA DINFNLSDYE EDLKQMKNLS KEEFVHILRR 240 QSTGFSRGSS KYRGVTLHKC GRWEARMGQL LGKKAYDKAA IKCNGREAVT NFEPSTYEGE 300 RVSEGSSEGG RNMLDLNLGI SPPSLENCQK DNEGHLRFQS GPYYANDRST MMESNADAAV 360 GDPPFKGLVM TSEHAPLWNG LQSSFFPNEE SVTEKRLALG SSQGVPDWPW QIHGQVNATQ 420 VPLFSAAASS GFSFSATHLP AAIHPPRQPG LTAHNLHFTP AKASLNSSQY RHQFNPQQAP 480 P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.1 | 1e-118 | AP2 family protein |