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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022146223.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | AP2 | ||||||||
Protein Properties | Length: 496aa MW: 54417.9 Da PI: 6.796 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.6e-17 | 158 | 207 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022146223.1 158 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHSAARAYDRAAIKFRG 207 78*******************......55************************997 PP | |||||||
2 | AP2 | 40.9 | 5.1e-13 | 250 | 300 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ g +k+++lg f+++ eAa+a+++a+ k +g XP_022146223.1 250 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAARAYDKAAIKCNG 300 89********.7******...5...334336**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 496 aa Download sequence |
MFDLNLNVDS PDATQNGDSV MFFEKLPQGS GNQMDEYESG TSNSSIVNAD TSSNGGDDDS 60 CSTRAAGELF TFNFEILKAG SANDVVTKEF FPIGGTVNAD FGSLQGQNSA SSSSSSSRKN 120 WINLAFDRSG SGGEGRIVQP VQPQQVKKSR RGPRSRSSQY RGVTFYRRTG RWESHIWDCG 180 KQVYLGGFDT AHSAARAYDR AAIKFRGVDA DINFNLSDYE EDLKQMKNLS KEEFVHILRR 240 QSTGFSRGSS KYRGVTLHKC GRWEARMGQL LGKKYIYLGL FDSEVEAARA YDKAAIKCNG 300 REAVTNFEPS TYEGERVSEG SSEGGRNMLD LNLGISPPSL ENCQKDNEGH LRFQSGPYYA 360 NDRSTMMESN ADAAVGDPPF KGLVMTSEHA PLWNGLQSSF FPNEESVTEK RLALGSSQGV 420 PDWPWQIHGQ VNATQVPLFS AAASSGFSFS ATHLPAAIHP PRQPGLTAHN LHFTPAKASL 480 NSSQYRHQFN PQQAPP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-129 | AP2 family protein |