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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022145541.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | AP2 | ||||||||
Protein Properties | Length: 505aa MW: 55449.9 Da PI: 6.5674 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.7e-17 | 167 | 216 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022145541.1 167 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 216 78*******************......55************************997 PP | |||||||
2 | AP2 | 42.7 | 1.4e-13 | 259 | 309 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+++ +g XP_022145541.1 259 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAALRCNG 309 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 505 aa Download sequence |
MVFAEGGASN PMLDLNLEFV SSGSAFDSVE MVTGKMLQFP ANRMESTGSF NSSSVVNGDP 60 SASTTGDEDS SSNADEAFPY SFNAVQESLT AKSLSLSDDR RDQTMQLFPL TGGFSSGSSS 120 QKRWPEVSRP EYGYRGGVPE RGATVQPAQQ QHQPIRKNRR GPRSRSSQYR GVTFYRRTGR 180 WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGIDAD INFNVSDYDE DIKQMSNFTK 240 EEFVHILRRH STGFSRGSSK YRGVTLHKCG RWEARMGQFL GKKYIYLGLF DSEIEAARAY 300 DKAALRCNGK EAVTNFEPSS YVAEMASETD AGEDNQILDL NLGIAPPNNL SDAQSESIDI 360 YGNGFHHGLH DFLVDRRATL ENSVSAAIRS SQAYGFAVPS DYHSSWNVSN SSFFPIARER 420 ATEMRNLGVG SWEWQIHSPP TASVPLFSAA ASSGFPFSSA SSSSSSSTAI VSPFSELHCP 480 AIFHHHASAP PISNGSNFSN FYCRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-104 | AP2 family protein |