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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022136672.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | AP2 | ||||||||
Protein Properties | Length: 523aa MW: 58485.1 Da PI: 8.8584 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.4 | 2.7e-16 | 188 | 247 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022136672.1 188 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 247 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 51 | 3.6e-16 | 290 | 341 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+fgt eeAa+a++ a+ k++g XP_022136672.1 290 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFGTQEEAAEAYDIAAIKFRG 341 57****************988532...5************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 523 aa Download sequence |
LSVMPLKSDG SLCVMEAISR SQPREMMPNL PPKLEDFLGG ATHGREATAL SLDSIYYNQN 60 AEAESEREHS LNLFKQQHVY LQSQRYYSEM FHFPAEETSK ESHIAGYCSE IRQAMEQQID 120 GSFGGMTCQD LQPLSLSMSP GSQSSCVTAP SQISHSGPAT LETKKRGPAG QKQPVHRKSI 180 DTFGQRTSQY RGVTRHRWTG RYEAHLWDNS CKKEGQTRKG RQVYLGGYDM EEKAARAYDL 240 AALKYWGPST HLNFSLRNYH VEIEEMKNMN RQEYVAHLRR KSSGFSRGAS IYRGVTRHHQ 300 HGRWQARIGR VAGNKDLYLG TFGTQEEAAE AYDIAAIKFR GVNAVTNFDT SRYNIERIMA 360 SSGLLSGEFA RRNKDLKPTN AIEHKEPTQN ITRINLSEIS NSNNIDWRTV FHXTLLLDPN 420 ASIESLDQKS MASGIALQHL IGVETVNCDR AMGNDSSKLK AHFSNGSSVV SSLSSSRETS 480 PDKSNSSSSV LFGKAPFESN GGIWLPSNQM RPVPISLPVW NDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-143 | AP2 family protein |