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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022135436.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | AP2 | ||||||||
Protein Properties | Length: 467aa MW: 51329.9 Da PI: 8.4327 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.3 | 2.6e-15 | 122 | 181 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022135436.1 122 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 181 57*******************666664477446*************************98 PP | |||||||
2 | AP2 | 47.4 | 4.7e-15 | 224 | 275 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022135436.1 224 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 275 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 467 aa Download sequence |
MNNNSTNNDN SCSQNWLPFS SLSHNSNLSL FHHHPTDLEI FTAAPKLEDF LRPSPPFHFS 60 AAAAFSQPCD SDLKTIAASF LRGDPPQQQH VLHHPHAPPP PLPDAPPPPP KKAVDSFGQR 120 TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQVYLG GYDKEEKAAR AYDLAALKYW 180 GPTTTTNFPV SDYEKELEDM KNMTRQEFVA SLRRKSSGFS RGASIYRGVT RHHQHGRWQA 240 RIGRVAGNKD LYLGTFSTQE EAAEAYDIAA IKFRGLNAVT NFDISRYDVK SIASSNLPIG 300 GMSGSKSKTA SDSAASDSGG SRSTEERDHH SPASSTATLS FAVPIKQDPS DQYWSVLGYS 360 MGSFSTVVSK PDSIPVPSSS PFQQSPNPGP HMMLPAITNI SSNENEGGVY GGVYVQQPQP 420 QPQPQQQQYA TPIALSSGIS FEIGQSMRGL EAHSKASLFQ TPIFGME |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-130 | AP2 family protein |