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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022133310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | AP2 | ||||||||
Protein Properties | Length: 632aa MW: 69842.7 Da PI: 7.6374 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51 | 3.6e-16 | 291 | 350 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022133310.1 291 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 350 78*******************988886678446*************************98 PP | |||||||
2 | AP2 | 46.9 | 6.7e-15 | 393 | 444 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022133310.1 393 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 444 57****************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 632 aa Download sequence |
MNNVNGNSCN WLGFSVSPNV NMELSSSSAT AVSPSIPANL FHSPSQFNYG ICYGVDGENG 60 GFYSPLSVMP LKSDGSICSM EALTRQHPQE VVSSSTPKLE DFFGGATMGS HHYESNDREV 120 MALSLDSIFC HQNPTHHEPQ TQAFPHFSSL RSREMMVQDS KVIMPDGCNL QQQQHPTVAE 180 SEISGMKNWA APRNYGTNNS SFEQKMVSCM SENGGEPGSI NAMAYGDLQS LSLSMTMSPS 240 SQSSCVTATQ HVSPAMADCS AMDTKKRGHE KMDQKQIVHR KSLDTFGQRT SQYRGVTRHR 300 WTGRYEAHLW DNSCKKEGQS RKGRQVYLGG YDMEEKAARA YDLAALKYWG PSTHINFPLE 360 NYQKELEEMK NMSRQEYVAH LRRRSSGFSR GASIYRGVTR HHQHGRWQAR IGRVAGNKDL 420 YLGTFSTQEE AAEAYDIAAI KFRGMNAVTN FDITRYDVER IIASNTLLSG DLAKRKQHTE 480 FDNESLRQSP ATPNSNSEAM PLPTSQSIHT QSESDWKMAL YQSSQQLVPK PRLSSGITND 540 GSRIGLEDSA KLGAHFSNAS SMVTSCSLSS SREESPDKTS LSMVFGIPQS TSKPFAAAPA 600 SNMNSSWIAS AQQLRAANCM SQLPVFAGWN NT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37750.1 | 1e-147 | AP2 family protein |