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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022133074.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Momordiceae; Momordica
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Family | AP2 | ||||||||
Protein Properties | Length: 514aa MW: 56913.7 Da PI: 6.765 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.3 | 1.4e-16 | 143 | 192 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022133074.1 143 SQFRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 192 789******************......55************************997 PP | |||||||
2 | AP2 | 43.8 | 6.5e-14 | 235 | 285 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_022133074.1 235 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 285 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 514 aa Download sequence |
MWDLNDCPEE RGGDESEAEA EAEACWSPKT SEEKGKRVGW GGSVSNSSSS ALLLEEGSDE 60 EELYGSMEID DPSPGPVTRQ FFPLQDSTAA PPPTTASAFP RAHWVGVKFC HPDPLAAANS 120 IKSTTDLSHP IKKSRRGPRS RSSQFRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA 180 RAYDRAAIKF RGVEADINFS IEDYEEDLKQ MGNLTKEEFV HVLRRQSTGF PRGSSKYRGV 240 TLHKCGRWEA RMGQFLGKKY VYLGLFDTEI EAARAYDKAA IKCNGKEAVT NFDPSIYDNE 300 LNPTADSIGN LTDHSLDLSL GNSSSKQNDS PNAAVDPHHS SSVPLSMEAE WQRNHHQVFR 360 PPQLNLLQES SGGASKNYNA QRRNNNNTNR YLESETMHLL SQTHIQSPAS FEMQRHGQFS 420 GDQPHSQILL HNHNHNPSLN SLNYQIQFSG SSNRNGGRIG SDLSLSLSDN NQLLQSGPSQ 480 ALATAAASSG FAPQIIPSKN WLQKNGFHCL MRPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-120 | AP2 family protein |