PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp1322s0006.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NF-YC | ||||||||
Protein Properties | Length: 142aa MW: 15308.7 Da PI: 9.7659 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 45.1 | 2.3e-14 | 12 | 92 | 19 | 98 |
NF-YC 19 helPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdivpr 98 ++P r+kki+k d+d++++ aea l+s + ++f+ l+ rs a e+kr+ +k + +a +r + dfl+d p Kaladp1322s0006.1.p 12 PSFPTGRVKKIMKIDKDINKVNAEALHLISCSTDVFLQFLAERSAAVATEKKRKIVKLEHLRTAAKRHLpTSDFLLDSLPA 92 589**********************************************************99998864389*****9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MAENDSDDPI TPSFPTGRVK KIMKIDKDIN KVNAEALHLI SCSTDVFLQF LAERSAAVAT 60 EKKRKIVKLE HLRTAAKRHL PTSDFLLDSL PAPQSLPVVD GPAAEIRARP AEVKPAPAGT 120 RRIDQIFAKS GKEAAGSIIE T* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43250.1 | 6e-33 | NF-YC family protein |