PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp1295s0016.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 197aa MW: 21458.8 Da PI: 5.3296 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.6 | 2.7e-17 | 22 | 72 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++y GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa a++ a+++++g Kaladp1295s0016.1.p 22 PKYLGVRKRA-WGKWVSEIREPRK---KSRIWLGTFQTAEMAAIAHDVAALAIKG 72 79*****887.**********843...6**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MEQVGKTREE EGKNSNSSMH HPKYLGVRKR AWGKWVSEIR EPRKKSRIWL GTFQTAEMAA 60 IAHDVAALAI KGGKVRLNFP DLARELPRPA TADPKDIQAA AAQAATYKLS ASGEQESPAA 120 ASSDNSPATT ASPTCTHSES RNSDSVAHSS FDDAFFDTLP DLFDNLSSEA DIYESLESSC 180 FLQKDFCWAS GEWFIA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35700.1 | 5e-33 | ERF family protein |