PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp1153s0008.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 248aa MW: 27672.1 Da PI: 8.7649 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.3 | 4.6e-19 | 78 | 126 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr+++ +g+WvAeIr p++ r+r++lg+f+tae+Aa a++ a+ l+g Kaladp1153s0008.1.p 78 YRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEDAATAYDTAAYILRG 126 9******9.**********955...5**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MVSSAASTSL FFPIWPQYET QPSTTDWPEI SQTSTSHQSN DGSREFWLSA RKTQPMKYTT 60 GGKMQQKAST STSQGKAYRG VRQRHWGKWV AEIRLPRNRT RVWLGTFDTA EDAATAYDTA 120 AYILRGDYAQ LNFPDQKHQL NSNSLSGSTK ALLEAKLQAI ESQAQRKKTI EDPASLQSSE 180 TSQISLKNSS MEDLKLKVLR EVPLKKELIE LDNKFSGEVL GDMEGGGGIQ LSRMPSLDMD 240 MIWDAIL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G13620.1 | 9e-53 | ERF family protein |