PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0891s0016.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 459aa    MW: 51680.6 Da    PI: 8.8308
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0891s0016.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.65.6e-17120169155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  Kaladp0891s0016.1.p 120 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 169
                          78*******************......55************************997 PP

2AP2445.6e-14212262155
                  AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          s+y+GV+ +k  grW+A+   +     +k+++lg f+t+ eAa+a+++a+ k +g
  Kaladp0891s0016.1.p 212 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 262
                          89********.7******5553..2.26**********99**********99776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    
MRDLNGSPNT SDKFINRDNS SSSEDEHNPA AETTENVARK RSSKIFGFSV SHEDDESASA  60
MTTRQFFPVD GETVSSSSSG FPRAHWVGVK FCQSEPPGVP SASHLQPLKK SRRGPRSRSS  120
QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV DADINFNLDD  180
YQVDLKQMSN LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL  240
GLFDTEIEAA RAYDKAAIKC NGKDAVTNFD PSIYENEITN SPEYSAGNSD HDLDLSLGNS  300
RHKQKVLQVD DVEQPVPMDP QSYDPDLRSS SYSFRPMHQE VRRRFSETQT PQQSPSNEQQ  360
QQREREQYGG GGEPSMLPPT SNFHQIQFPS RRNVSSRGNC ELSLSTTSNN NQHWQTTEMF  420
GNAAASSGFP SYTTRQNWSS SQGRTGFRSP PLYHPRPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-120AP2 family protein