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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0891s0016.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | AP2 | ||||||||
Protein Properties | Length: 459aa MW: 51680.6 Da PI: 8.8308 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.6 | 5.6e-17 | 120 | 169 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Kaladp0891s0016.1.p 120 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 169 78*******************......55************************997 PP | |||||||
2 | AP2 | 44 | 5.6e-14 | 212 | 262 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g Kaladp0891s0016.1.p 212 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 262 89********.7******5553..2.26**********99**********99776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 459 aa Download sequence |
MRDLNGSPNT SDKFINRDNS SSSEDEHNPA AETTENVARK RSSKIFGFSV SHEDDESASA 60 MTTRQFFPVD GETVSSSSSG FPRAHWVGVK FCQSEPPGVP SASHLQPLKK SRRGPRSRSS 120 QYRGVTFYRR TGRWESHIWD CGKQVYLGGF DTAHAAARAY DRAAIKFRGV DADINFNLDD 180 YQVDLKQMSN LTKEEFVHVL RRQSTGFPRG SSKYRGVTLH KCGRWEARMG QFLGKKYVYL 240 GLFDTEIEAA RAYDKAAIKC NGKDAVTNFD PSIYENEITN SPEYSAGNSD HDLDLSLGNS 300 RHKQKVLQVD DVEQPVPMDP QSYDPDLRSS SYSFRPMHQE VRRRFSETQT PQQSPSNEQQ 360 QQREREQYGG GGEPSMLPPT SNFHQIQFPS RRNVSSRGNC ELSLSTTSNN NQHWQTTEMF 420 GNAAASSGFP SYTTRQNWSS SQGRTGFRSP PLYHPRPS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36920.1 | 1e-120 | AP2 family protein |