PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0878s0027.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 180aa MW: 19248.1 Da PI: 8.7656 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 123.7 | 9.1e-39 | 20 | 119 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +CaaCk+lrr+Ca+ C+++pyf +p+kf +vh++FGasnv+kll ++pe r da+++lvyeA++r+rdPvyG++g i +lqqql +l Kaladp0878s0027.1.p 20 PCAACKLLRRRCAEACPFSPYFSPLEPHKFLAVHRVFGASNVSKLLLEAPEGLRADAANTLVYEANVRIRDPVYGCMGAIAALQQQLLSL 109 7***************************************************************************************** PP DUF260 91 kaelallkee 100 +a+l+++++e Kaladp0878s0027.1.p 110 QAQLDAVRAE 119 *****99987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 180 aa Download sequence |
MTEKREQVLG PEVALNKVTP CAACKLLRRR CAEACPFSPY FSPLEPHKFL AVHRVFGASN 60 VSKLLLEAPE GLRADAANTL VYEANVRIRD PVYGCMGAIA ALQQQLLSLQ AQLDAVRAEI 120 LKHDVKISQA AAASSAPSIS SKNSTIALAA ISNNNISIQT ATTHHHQGDH HLMRSSSAT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40470.1 | 2e-53 | LBD family protein |