PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0868s0040.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 284aa MW: 31700.5 Da PI: 6.7907 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.1 | 1.3e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd ll +++ + G g W++++ + g++R++k+c++rw++yl Kaladp0868s0040.2.p 14 KGAWSEEEDALLRECIDKNGEGKWHLVPLKSGLNRCRKSCRLRWLNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.1 | 7.3e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++++E +ll++++k+lG++ W++Ia +++ gRt++++k++w+++l Kaladp0868s0040.2.p 67 RGKFSEDEVDLLLRLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 284 aa Download sequence |
MLAAEHDGPR GVRKGAWSEE EDALLRECID KNGEGKWHLV PLKSGLNRCR KSCRLRWLNY 60 LKPNIRRGKF SEDEVDLLLR LHKLLGNRWS LIAGRLPGRT ANDVKNYWNT HLRKKTMLRL 120 QAAAAAADCH RATTKVIRPR PQTFSKTLRV QCMRSSQQQQ QAAPAAGLLQ HTTTSTTAVS 180 KLEGHHDNNA NPDAAEEQIQ WWKSLLDDQL SDGQEVAAAA LASESRSDDH VSYEIWAAED 240 QSGDRPEETG LMTGEVAFDI ELWDFLADDE AQATSNLLQG PSS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G66370.1 | 2e-59 | MYB family protein |