PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0864s0009.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | LBD | ||||||||
Protein Properties | Length: 219aa MW: 24381.7 Da PI: 7.7123 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 125 | 3.8e-39 | 9 | 109 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 +C aCk+lrrkCa+dC++apyf+ +q p++fa++hk+FGasnv+kll ++p ++r da+ ++ yeA+ar+rdPvyG+v++i +lq+q+++ Kaladp0864s0009.1.p 9 PCGACKFLRRKCAPDCIFAPYFCPDQgPERFAAIHKVFGASNVSKLLLHVPVHDRGDAVLTVGYEAQARLRDPVYGCVAHIYALQKQVAC 98 7*********************999889************************************************************** PP DUF260 90 lkaelallkee 100 l+a+l +l+++ Kaladp0864s0009.1.p 99 LQAQLMQLRAQ 109 *****999877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MASAAAGSPC GACKFLRRKC APDCIFAPYF CPDQGPERFA AIHKVFGASN VSKLLLHVPV 60 HDRGDAVLTV GYEAQARLRD PVYGCVAHIY ALQKQVACLQ AQLMQLRAQM THNNMIQGNK 120 PQNQQWTGTS NNTLSSSMVS RFLGDFETGY NINSSISPPS SIESTTSFDE DNRHNREAML 180 GMPEMWQRQE CAKRQRTSAY CHDEWSELQE LALKMMKD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42430.1 | 4e-48 | LBD family protein |