PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0839s0004.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ERF

Protein Properties

Length: 809aa MW: 90327.1 Da PI: 8.7619

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0839s0004.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	23.1	1.8e-07	664	695	19	53
AP2 19 IrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 Irdp g++ r++lg+f+tae+A + ++aa++++ Kaladp0839s0004.1.p 664 IRDP---GRKSRVWLGTFDTAEDATRSYDAAALEF 695 7886...546**********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MAPEYVMHGR FIVESDVYIF VTFCAQDENY LNQKCSGANY TSNSIYQKNL NTLLSFLSSN 60 NDIDYGFYNF SEGEGIDRVN SIALCRGDIS QNSCKRCISY STTDLPQRCP IQKEAIVWYD 120 NCMLRYSNRY IFGSWEQPDN LSWDLVNVTD PNLFTQALIG LLTGLQKQAS SGDSQKKFAI 180 GDTSYANSTR IYGLVQCTPD LTEVQCHDCL NVTFTAITGQ LFGRPRGRVL GPSCNFRYAM 240 NQFYEIPPPA SPPPATAPSP PTPTTIVPPT GEGSDKVRNI IIGIVSTVCS VMLIICIFIF 300 LRVRKRKEKG QHNFLLTDAH DDITSTESLQ FKFETIKVAT DNFKKDNKLG QGGFGSVYKG 360 KLVEGKEIAV KRLATNSGQG DLEFKNEVGI VAKLQHRNLV RLLGFCLEGN ERLLIYEFVP 420 NSSLDRFLFD PLKRACLDWE TRYKIIGGIA KGLLYLHEDS RLRIIHRDLK AGNILLDEEM 480 CPKIADFGMA RLFILNETQG DTNRIVGTYG YMAPEYAMHG KFSVKSDVYS FGILLLEIIS 540 GQKYNRFCIG GEPYELTSFA WDSWKVGTAT NMIDPTIFSG PRNDILRIIH IGLLCVAYLA 600 TIESEKTITS GSAGFLPFNQ SNLHHVHLES SSAGFRHALF LDGGEDGGGG GAFQRSEEAA 660 VRAIRDPGRK SRVWLGTFDT AEDATRSYDA AALEFSLTGA AAKSLTTPAR AASSNPARRR 720 LVSNWGRRSA LTASSFSFSR CCLRTVRVII TIRLSGIKPS SFNLTPLWVP RTNRFHLTRF 780 RFAPRQRMYT PSRFISNPRL QTLTPRQL*

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MAPEYVMHGR FIVESDVYIF VTFCAQDENY LNQKCSGANY TSNSIYQKNL NTLLSFLSSN  60
NDIDYGFYNF SEGEGIDRVN SIALCRGDIS QNSCKRCISY STTDLPQRCP IQKEAIVWYD  120
NCMLRYSNRY IFGSWEQPDN LSWDLVNVTD PNLFTQALIG LLTGLQKQAS SGDSQKKFAI  180
GDTSYANSTR IYGLVQCTPD LTEVQCHDCL NVTFTAITGQ LFGRPRGRVL GPSCNFRYAM  240
NQFYEIPPPA SPPPATAPSP PTPTTIVPPT GEGSDKVRNI IIGIVSTVCS VMLIICIFIF  300
LRVRKRKEKG QHNFLLTDAH DDITSTESLQ FKFETIKVAT DNFKKDNKLG QGGFGSVYKG  360
KLVEGKEIAV KRLATNSGQG DLEFKNEVGI VAKLQHRNLV RLLGFCLEGN ERLLIYEFVP  420
NSSLDRFLFD PLKRACLDWE TRYKIIGGIA KGLLYLHEDS RLRIIHRDLK AGNILLDEEM  480
CPKIADFGMA RLFILNETQG DTNRIVGTYG YMAPEYAMHG KFSVKSDVYS FGILLLEIIS  540
GQKYNRFCIG GEPYELTSFA WDSWKVGTAT NMIDPTIFSG PRNDILRIIH IGLLCVAYLA  600
TIESEKTITS GSAGFLPFNQ SNLHHVHLES SSAGFRHALF LDGGEDGGGG GAFQRSEEAA  660
VRAIRDPGRK SRVWLGTFDT AEDATRSYDA AALEFSLTGA AAKSLTTPAR AASSNPARRR  720
LVSNWGRRSA LTASSFSFSR CCLRTVRVII TIRLSGIKPS SFNLTPLWVP RTNRFHLTRF  780
RFAPRQRMYT PSRFISNPRL QTLTPRQL*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	304	309	RKRKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12020.2	8e-18	WRKY family protein