PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0808s0059.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GATA

Protein Properties

Length: 547aa MW: 60781.8 Da PI: 8.0682

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0808s0059.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	45.9	7.9e-15	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ Kaladp0808s0059.1.p 7 CCHCGVTSTPLWRNGPADKPVLCNACGSRWRTKGS 41 99************77777*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MGKQGPCCHC GVTSTPLWRN GPADKPVLCN ACGSRWRTKG SLTNYTPLHA RAEPEDYEIN 60 KHPRAKTISI NKQKEVKLVK RKQFYETECR SMGGAFSDSR SLSNYMDQDA SYRSSSGSAI 120 SNSESCGQFS KVEASELTDP DKSIIFDSVV TPKKKIVIPR SKPSPVQKLT RDLCTILHEQ 180 QQSYFSGSSE EDLLFNTATP MASMETGHGS VLIRHPSSIG QEEESEASSL TFDNKPCPGL 240 RSCLTPHNLV VNNKIKDSKF QFSGLEKSRK FSDLEMQQEQ IKRAKLQNEK LQILGNHNSP 300 LRTVDLKEIL NFKEFATHLT TEEHHRLLKY LPPSDIAPFP ESLITMFDSA HFVENLSSFQ 360 QLLAEGVFDI TLSGVKAEDC KTLRRFALSN LTKSKWVEHY NLLKKCRNGF TSSVVPGMHS 420 GVATMNIAKI KRPRDGSDTD LPDAKSAMKC PKRVTLKDMD KNKTALDNTA SCFSPKNLFA 480 LPPDNSSLAL DSFQYADDNA EQEDLLLDVP LSNSFPQAEL LHPTSNHGAL LTSPCSSSVY 540 PNLIRH*

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MGKQGPCCHC GVTSTPLWRN GPADKPVLCN ACGSRWRTKG SLTNYTPLHA RAEPEDYEIN  60
KHPRAKTISI NKQKEVKLVK RKQFYETECR SMGGAFSDSR SLSNYMDQDA SYRSSSGSAI  120
SNSESCGQFS KVEASELTDP DKSIIFDSVV TPKKKIVIPR SKPSPVQKLT RDLCTILHEQ  180
QQSYFSGSSE EDLLFNTATP MASMETGHGS VLIRHPSSIG QEEESEASSL TFDNKPCPGL  240
RSCLTPHNLV VNNKIKDSKF QFSGLEKSRK FSDLEMQQEQ IKRAKLQNEK LQILGNHNSP  300
LRTVDLKEIL NFKEFATHLT TEEHHRLLKY LPPSDIAPFP ESLITMFDSA HFVENLSSFQ  360
QLLAEGVFDI TLSGVKAEDC KTLRRFALSN LTKSKWVEHY NLLKKCRNGF TSSVVPGMHS  420
GVATMNIAKI KRPRDGSDTD LPDAKSAMKC PKRVTLKDMD KNKTALDNTA SCFSPKNLFA  480
LPPDNSSLAL DSFQYADDNA EQEDLLLDVP LSNSFPQAEL LHPTSNHGAL LTSPCSSSVY  540
PNLIRH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-120	GATA family protein