PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0807s0004.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 431aa MW: 48280.4 Da PI: 5.1159 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.9 | 7.6e-13 | 232 | 278 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR++++ +f Lr+l+P+ K++K++iL +++Y+k+L+ Kaladp0807s0004.2.p 232 NHVLAERRRREKLKRRFLVLRSLVPTT-----AKVDKISILDDTIKYLKELE 278 6899**********************6.....5****************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 431 aa Download sequence |
MDISTVSKRS DDVSTQRPSN STDRVTSALN ILDTQLVVSP HTSTSDPFGL AELDDSFIVE 60 SISEEAVLLQ NWQFMEDDDD LNQYVHDPGN SASKMTLVFA KVNRQSPLKP QECNQMKDTT 120 TGDLLGDEMH YQSVISAILQ TSVVGPHYGD TNKASSFVSF RKEEFAGITK SATPQRILKK 180 VLTQVPKMHS EVLLGPPEKD HKNVIQKGCD DTYLPEAEDL IDMDMPEETG LNHVLAERRR 240 REKLKRRFLV LRSLVPTTAK VDKISILDDT IKYLKELESK IEELESAKET AANTETTMVT 300 KSAQDGTKET SSYNYEVEET HIPSKKRRKA FDTGGNNINC RASSKRECND DLVVEVEEKD 360 VRVEVRCSWR KGLVPEVMEA LSDLDLESTS VCTRSSDGIL YLKITSKAQG LKVASAKLIK 420 QEMERIVRNR * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 237 | 242 | ERRRRE |
2 | 238 | 243 | RRRREK |
3 | 325 | 329 | KKRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63650.1 | 6e-34 | bHLH family protein |