PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0807s0004.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 431aa MW: 48280.4 Da PI: 5.1159

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0807s0004.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.9	7.6e-13	232	278	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h +ErrRR++++ +f Lr+l+P+ K++K++iL +++Y+k+L+ Kaladp0807s0004.1.p 232 NHVLAERRRREKLKRRFLVLRSLVPTT-----AKVDKISILDDTIKYLKELE 278 6899********************6.....5**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MDISTVSKRS DDVSTQRPSN STDRVTSALN ILDTQLVVSP HTSTSDPFGL AELDDSFIVE 60 SISEEAVLLQ NWQFMEDDDD LNQYVHDPGN SASKMTLVFA KVNRQSPLKP QECNQMKDTT 120 TGDLLGDEMH YQSVISAILQ TSVVGPHYGD TNKASSFVSF RKEEFAGITK SATPQRILKK 180 VLTQVPKMHS EVLLGPPEKD HKNVIQKGCD DTYLPEAEDL IDMDMPEETG LNHVLAERRR 240 REKLKRRFLV LRSLVPTTAK VDKISILDDT IKYLKELESK IEELESAKET AANTETTMVT 300 KSAQDGTKET SSYNYEVEET HIPSKKRRKA FDTGGNNINC RASSKRECND DLVVEVEEKD 360 VRVEVRCSWR KGLVPEVMEA LSDLDLESTS VCTRSSDGIL YLKITSKAQG LKVASAKLIK 420 QEMERIVRNR *

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MDISTVSKRS DDVSTQRPSN STDRVTSALN ILDTQLVVSP HTSTSDPFGL AELDDSFIVE  60
SISEEAVLLQ NWQFMEDDDD LNQYVHDPGN SASKMTLVFA KVNRQSPLKP QECNQMKDTT  120
TGDLLGDEMH YQSVISAILQ TSVVGPHYGD TNKASSFVSF RKEEFAGITK SATPQRILKK  180
VLTQVPKMHS EVLLGPPEKD HKNVIQKGCD DTYLPEAEDL IDMDMPEETG LNHVLAERRR  240
REKLKRRFLV LRSLVPTTAK VDKISILDDT IKYLKELESK IEELESAKET AANTETTMVT  300
KSAQDGTKET SSYNYEVEET HIPSKKRRKA FDTGGNNINC RASSKRECND DLVVEVEEKD  360
VRVEVRCSWR KGLVPEVMEA LSDLDLESTS VCTRSSDGIL YLKITSKAQG LKVASAKLIK  420
QEMERIVRNR *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	237	242	ERRRRE
2	238	243	RRRREK
3	325	329	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	6e-34	bHLH family protein