PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0674s0108.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

E2F/DP

Protein Properties

Length: 362aa MW: 39773.9 Da PI: 9.8303

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0674s0108.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	72.7	4e-23	15	80	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl l+ + + + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg Kaladp0674s0108.1.p 15 RKQKSLGLLCSNFLGLYDRDDVHSIGLDDAASKL---GV--ERRRIYDIVNVLESVGMLARKAKNQYSWKG 80 79**************9999********.....****************************98 PP
2	E2F_TDP	75.7	4.7e-24	144	224	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL+lltq+f+kl+ +s+ g ++l+++ak L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g Kaladp0674s0108.1.p 144 RREKSLGLLTQNFIKLFVCSNVGLISLDDAAKVLLGDghnstVMRTKVRRLYDIANVLSSVNLIEKtqhkeSRKPAFRWLG 224 689************************************999********************999988999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MAVAESGSGG SVYSRKQKSL GLLCSNFLGL YDRDDVHSIG LDDAASKLGV ERRRIYDIVN 60 VLESVGMLAR KAKNQYSWKG FGAIPRALQE LREEGVKESF GGSQGSIQIK VSDDEDDSYW 120 NSNNGSQPDK ANPSSASSKS ADNRREKSLG LLTQNFIKLF VCSNVGLISL DDAAKVLLGD 180 GHNSTVMRTK VRRLYDIANV LSSVNLIEKT QHKESRKPAF RWLGPGGKRE NGSATPPATQ 240 IELKKKRTFG TEISNIDFKR AKVDPPVGIK PVKTQAAPPV KTESLEYDSD RSAKGYQFGP 300 FAPAKTPAPA SEAPVKRMFD FERLAPAYRP QYQNQALKEL FGHYVEAWHS WYAEVVGTPL 360 N*

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MAVAESGSGG SVYSRKQKSL GLLCSNFLGL YDRDDVHSIG LDDAASKLGV ERRRIYDIVN  60
VLESVGMLAR KAKNQYSWKG FGAIPRALQE LREEGVKESF GGSQGSIQIK VSDDEDDSYW  120
NSNNGSQPDK ANPSSASSKS ADNRREKSLG LLTQNFIKLF VCSNVGLISL DDAAKVLLGD  180
GHNSTVMRTK VRRLYDIANV LSSVNLIEKT QHKESRKPAF RWLGPGGKRE NGSATPPATQ  240
IELKKKRTFG TEISNIDFKR AKVDPPVGIK PVKTQAAPPV KTESLEYDSD RSAKGYQFGP  300
FAPAKTPAPA SEAPVKRMFD FERLAPAYRP QYQNQALKEL FGHYVEAWHS WYAEVVGTPL  360
N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-119	E2F/DP family protein