PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0671s0013.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 227aa MW: 26095.9 Da PI: 6.6032

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0671s0013.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.2	1.6e-17	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd++l+++++ +G g W++ a+ g++Rt+k+c++rw++yl Kaladp0671s0013.1.p 21 KGPWTMEEDLILINYIANHGEGVWNSLAKSAGLKRTGKSCRLRWLNYL 68 79********************************************97 PP
2	Myb_DNA-binding	55.4	1.4e-17	74	117	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T+eE+ l+++++ ++G++ W++Ia++++ gRt++++k++w++ Kaladp0671s0013.1.p 74 RGNITPEEHMLILQLHDKWGNR-WSKIAKHLP-GRTDNEIKNFWRT 117 7999****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MDSKRPYFSS SSSSIDPEVR KGPWTMEEDL ILINYIANHG EGVWNSLAKS AGLKRTGKSC 60 RLRWLNYLRP DVRRGNITPE EHMLILQLHD KWGNRWSKIA KHLPGRTDNE IKNFWRTRIQ 120 KYINKQQDEN PPHHQEEDTQ LMMSTCEQVS QASSSQMSTT TTAASSDPNT FDNHHQASYS 180 PQQMFSYPSG NLEPYPNNNG GLPGDINDNM WNMEEFWSIN VVNNHD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27810.1	1e-74	MYB family protein