PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0671s0004.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 323aa    MW: 35917.9 Da    PI: 8.2982
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0671s0004.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.6e-12152198455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           h ++Er+RR+++N++f  L  ++P +     +K +K ++L  A++Y+k+Lq
  Kaladp0671s0004.1.p 152 DHIMAERKRREKLNQRFVALSAVIPGL-----TKKDKGTVLADATKYVKQLQ 198
                          699***********************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDQDQNFTNQ WMVNLHANLS VPIPTAVASD DLQNSNLLYD YQLAIMEAAM EDFQSNTIME  60
QLTTDTWASH DVSNSYSTAA DAASFPYSDW PNPTGVACPS QVNHYYDNRA TQFANNGYTI  120
WNENSVLKAG SETKCKAIRN ISSATRSSEA QDHIMAERKR REKLNQRFVA LSAVIPGLTK  180
KDKGTVLADA TKYVKQLQER IKTLEKQIKS RTMMESAVVV KKTLLAMNDI NKPGFFTKRT  240
LPEEPLPEIE VRFCGKKVLL KVHCNSKKGI TEKILSELAK LNLTVLNSSV LAFGSSALDI  300
TILAQVNFGF NSVNQIKVDL VI*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157162ERKRRE
2158163RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-46bHLH family protein