PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0671s0003.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 283aa    MW: 31771.2 Da    PI: 7.5445
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0671s0003.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.27.1e-14116163355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          ++h ++Er+RR+++N+++  L  ++P +     +K++Ka++Le A++Y+k+Lq
  Kaladp0671s0003.1.p 116 ENHIKAERKRREKLNQRIIALSAVIPGL-----TKMDKATVLEDATKYVKQLQ 163
                          689************************9.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MDQDQIFTSQ WKVNSHADLS CSIPMDPAFP DALQHSNLLF DYPLPPIFGT TMNDFQSNKP  60
TWPKRENHCY DNQVQQFPNN EYTTWNENYV SKAGPEAKSK AIRNISAATG SSEAEENHIK  120
AERKRREKLN QRIIALSAVI PGLTKMDKAT VLEDATKYVK QLQEQIKMLE KQTKSGTIIE  180
SAVVVKKTLL VINDDNITGF SNESSFIERT LPDESLPEIE ARFCDRKVLI RVHCDRKKGV  240
AEKILSEIEK LHMTVLNSSV LAFGSAAINV AVIAKVKFGF NV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122127ERKRRE
2123128RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.15e-45bHLH family protein