PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0550s0043.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 393aa    MW: 43042.9 Da    PI: 4.2716
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0550s0043.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-10200247355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           +    ErrRR r+++ ++ Lr+l+P+      +K++ a+i+  A+ Y++sLq
  Kaladp0550s0043.1.p 200 SKRIVSERRRRGRMKDNLHALRSLVPSI-----TKMDRASIVGDAILYVQSLQ 247
                          556678*********************7.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 393 aa     Download sequence    
MTDQYIPVTT MDGMYSSSTD HNHLAPPAII PDDFGCLHDD FITAYDFDQL LELIRDDDKE  60
EGSADPAVAD AYGSRCVEQQ QLLTIQDYEV DRLMMSVVEI ESRRFDTDEH ELVVVDAADA  120
QPQISIDMFA ACFGGGEFDN AAPVDLGGFM GGDSVPCMVD ALGVGEDDDD EDDGGVDGND  180
SYGNTTMIST TKTTGKTDRS KRIVSERRRR GRMKDNLHAL RSLVPSITKM DRASIVGDAI  240
LYVQSLQSKA NRLKVELAEL EASAASQGLY ATEHSNFHIA TSSANKRSTP PVPRYIKQMD  300
ACQVGEGEFY VKLVSNKGEE IAACLHKAIE SLRDGFTLQS SNLSLVSDDY ALTFTLRVKD  360
GGEEMNLPNL KMWLSRALHG HDFILEVSPS IN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-40bHLH family protein