PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0515s0238.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 353aa    MW: 38794.1 Da    PI: 8.3436
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0515s0238.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.31e-18195228134
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                          Cs C+tt TplWR+gp+g+k+LCnaCG+++rk +
  Kaladp0515s0238.1.p 195 CSDCNTTRTPLWRSGPQGPKSLCNACGIRQRKAR 228
                          *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MMTPIFLNPP NTQYFDLNNQ DHHQEDQLQQ VLLASSPFCP TIAASSTSIH LDQGLRISAT  60
HIMSDQSHAF NDQLEASKNV FSFGESPPYE AQMTNTDNYG SHNRDLFIFK QQEDQEQNNL  120
RGTGGNMTAD SNGSSLRWMS SRMRMMRKMI NSNGPKIDPR GGSRIITSST SPDHSPQVGI  180
NSDNNNNNHN MIRVCSDCNT TRTPLWRSGP QGPKSLCNAC GIRQRKARKA AMEAAAAAAT  240
NSSCEASSST STKTTIKLMI NKDKKKSRAT SNTCVSQHSN KKQTPCKQQA SQLADSDHNN  300
SSISSSRKQQ LSFEEFAVNL LSKNAAFHHM FPQDEEEGAL LLMALSCGLI QS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56860.13e-18GATA family protein