PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0441s0001.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 268aa MW: 30125.7 Da PI: 8.1198 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.5 | 9.8e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed++l d++k G g W+ +++ g++R++k+c++rw++yl Kaladp0441s0001.1.p 14 RGAWTAQEDDILRDYIKVNGEGGWRNLPKKAGLNRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.3 | 6.2e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ Kaladp0441s0001.1.p 67 RGNISEDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 111 7899******************.*********.************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MGRSPCCSKE GLNRGAWTAQ EDDILRDYIK VNGEGGWRNL PKKAGLNRCG KSCRLRWLNY 60 LRPDIKRGNI SEDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT TLGKKVGSEV 120 SQRSSSKKGK MSKSKETSKA VPEPDSSTQP LTQPIRTKAF RCTKVHIPAT IHSPREDYNK 180 HEDTKPTHSQ SAQQTSSPDS GEYVVDFSQF LDFGSDEFQG IDTCMGFNGQ FDVPVTKDWM 240 RSDISGLENS SMELESLGFL LDGEGWY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 7e-62 | MYB family protein |